I write bioinformatics software at Oregon Health and Science Univeristy. I am passionate about building and contributing to open source software for biology research and data analysis.
I specialize in the development of reproducible data pipelines, and my favorite tool for doing so is Snakemake.
Some projects I have worked on:
- gopeaks: calling peaks from CUT&TAG sequencing data
- karyopype: a chromosomal visualization python API
- grayle: a shoe recommendation app
In my spare time I enjoy knitting, cycling, and tennis.